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Syllabus
for RET Examination-2009
Sub : Botany
[Based on M. Sc. Syllabus (Semester System)]
Phycology:
Classification of algae based on ultra-structure,
Thallus organization and range of variation, Origin and
evolution of eukaryotic algae and chloroplast,
Cyanophyta - Cell structure, cyanobacterial genetics,
ecology and economic importance, Rhodophyta - general
characters, ecology, phylogeny, and importance,
Bacillariophyta - Cell structure and cell division,
reproduction, ecology and economic importance,
Phaeophyta - General characters, cellular chemistry,
ecology, Chlorophyta - General characters,
ultrastructure and affinity, Phytoplankton ecology -
Factors influencing phytoplankton productivity, Algae as
food, feed and uses in industry: algal bloom, algal
bio-fertilizer.
Mycology:
Cytology and Genetics: Homothallism and Heterothallism,
Genetic control of mating system, Parasexuality; Growth:
Measurement and Kinetics, Nutritional and Physical
requirements, Sporulation: environmental control, Effect
of physical factors, Spore dormancy and spore dispersal;
Fungi as saprophyte, predator, parasite and as symbiont;
Uses of fungi: Food, Industrial and Medicinal,
biopolluting, Lignocellulosic conversion; Cultivation of
Mushroom, Mycorrhizae; Mycotoxin and Mycotoxicosis,
Mycoses.
Plant Pathology:
Mechanism of pathogenesis, Contact (Electrotaxis and
Chemotaxis),Post penetration and development; Factors
affecting infection, Plant factors, Nutrition of plant
pathogen, Inoculum potential, Latent infection,
environmental and biotic factors; Enzymes and plant
diseases; Physiology of diseased plant; Toxin and plant
diseases; Biological methods of plant disease control,
resistant varieties, hyper – parasites, trap crops and
atagonistic plants, Antibiosis competition analysis;
Chemical methods of plant disease control: types of
chemical used, Methods of application of fungicides,
Determination of fungi toxicity, Factors affecting
fungicidal efficiency protectant and systemic fungicides
uptake, translocation and mode of action of systematic
fungicides; Impact of air pollutant on plants parasites
and plant diseases, source of air pollutant specific
combustion sources, products of photochemical reaction,
Naturally occurring phytotoxic air pollutants, gases
released by green plants.
Bryophytes:
Current concepts of classification, origin and
evolutionary trends, Ecology and economic importance,
Classification of mosses with Indian examples and
distribution, cytogenetics of bryophytes, diversity of
gametophytic and sporophytic structures of bryophyta,
methods of spore dispersal.
Pteridophytes:
Classification (latest concepts); distribution of extant
groups in time and space, Evolutionary tendencies,
affinities and their significance of the members of
Rhyniophytopsida, Zosterophyllopsida, Trimerophytopsida;
Psilotales, Lepidodendrales, Selaginellales, Isoetales,
Sphenophyllales, Equisetales, Evolution of
morphological, anatomical, reproductive structures of
Cladoxylales, Ophioglossales, Marittiales, Osmundales,
Filicales (Gleicheniaceae, Cyatheaceae, Polypodiaceae),
Salviniales, Types of spore, induction of spore
germination, gametophyte types, stomata types and
development, Diversity of ferns in an ecological
perspective; endangered and endemic pteridophytes and
their conservation, Cytogenetics of ferns, apospory,
apogamy, apomixis and polyploidy.
Gymnosperms and Paleobotany:
Progymnosperms - origin, classification,
characterization; importance in tracing evolution of
gymnosperms, Gymnosperms: classification, economic
importance and distribution in India, General account on
the morphology, anatomy, reproduction and affinities of
the major groups of plants (Extinct & Extant).Variation
in the structure of sperm; pollen grains, pollen
germination; Trends of specialization in male and female
gametophyte, Palaeobotany: radiometric datings (C14,
Argon and Uranium dating), techniques for studying
fossil plants (ground thin section, peel technique and
microfossil analysis), Fossil plants in the
interpretation of past climatic changes (Quaternary and
Pre-quaternary), Indian Gondwana system,
Palaeo-palynology: basic principle and its application
in stratiography; palaeoclimate and oil exploration.
Embryology:
Microsporogenesis – male gametophyte – pollen fertility
and sterility, pollen storage viability and germination.
Megasporogenesis – embryo sacs – development and types.
Embryo endosperm and seed development – polyembryony,
parthenocarpy. Molecular basis of embryogeny in
Arabidopsis.
Plant Anatomy:
Differentiation - alternate pathway of development,
polarity, pattern formation, geneticcontrol,
environmental effect. Shoot and root apical organization
including cytohistological zonation of shoot apical
meristem. Cell wall - chemistry, ultrastructure,
biosynthesis and phylogeny. Evolution of xylem and
phloem; wood anatomy, nodal anatomy and floral
vasculature in systematics. Vascular cambium,
experimental anatomy on cambial activity, factors
influencing cambium activity; structure and function of
cork cambium. Application of anatomical studies in
climatology, genetics, biomedical research and forensic
science.
Pharmacognosy:
Drug chemistry and methods of studying bioenergetic
pathways of medicinal plants. Drug evaluation techniques
for quality control; Organoleptic evaluation of drugs;
Microscopic evaluation of drugs, biological evaluation
of drugs (bioassays) and its importance. Chemical
structure, classification, definition of classes. Uses
and general idea of drugs. Glycosides and glycoside
yielding drugs – Discorea sp. Alkaloids and alkaloidal
drugs – Cinchona sp, Steroids and steroidal drugs –
Digitalis sp, Thevetia sp. Antibiotics – general
account, classification, mechanism of action of
penicillin, role of different antibiotics.
Taxonomy of angiosperms:
Principles of Taxonomy and modern system of
classification including Cronquist and Takhtajan system.
Role of cytology (Cytotaxonomy), embryology, anatomy,
palynology and phytochemistry in taxonomy. Taxonomic
hierarchy, numerical taxonomy – definition, principles,
procedures and utilities. History of International code
of Botanical nomenclature, aims and important provisions
for names of taxa of different ranks and hybrids, rules
for valid and effective publication, rejection and
retention of names. Role of Botanic gardens and Herbaria
in taxonomic studies. Endangered, rare and threatened
plants in India and their conservation. Study of
angiosperm groups: Characterization of broad groups of
angiosperm following Cronquist classification. Variation
and Speciation: Types of variation, isolation mechanism
and speciation. Taxonomic literature, Taxonomy,
Systematics – concept and historical development,
Importance of Floras, Revisions, Monographs and
Taxonomic literature, Preparation of Taxonomic keys and
its importance. Classification of Angiosperms – a brief
history and comparative study of a few systems of
classifications and changed concepts in the light of
modern researches. Historical development of the
International Code of Botanical nomenclature (ICBN);
Principles and salient provisions of the code;
typification; role of priority; retention; rejection and
conservation of epithets (names); name of hybrids.
Biosystematics. Origin of Angiosperms; primitive
angiosperms. Migration and dispersal.
Plant Ecology & Biodiversity:
Ecosystem: Biosphere and ecosphere, abiotic and biotic
components, biomass – standing crops. Ecological niche –
spatial, trophic and multidimentional niche. Autoecology,
synecology, ecocline, ecotype and its types. Homeostasis
of ecosystem, indicator plants.
Pollution: Environmental deterioration - water pollution
(fresh water bodies), air pollution, green house effect,
importance of ozone layers and its depletion, acid rain,
noise pollution, radiation pollution, pollution of land
by solid waste.
Soil and water conservation: Soil erosion, its effect
and control, water conservation, marine ecosystem,
mangrove ecosystem, problems and managements of
ecosystems.
Biodiversity: Concept of biodiversity, impact of human
activities on biodiversity, conservation strategies,
IUCN categories of threat,
Phytogeography: Theories of plant distribution (Theory
of Continental Drift, Age and Area Theory and Theory of
Tolerance). Endemism and its types, Major biomes of the
world, Vegetational types of India. Biodiversity:
concept and levels; IUCN threat categories, distribution
and global patterns, International Programmes in
relation to conservation – IUCN, WWF, MAB; Importance.
Strategies for conservation – in situ conservation:
International efforts and Indian initiatives; protected
areas in India – sanctuaries, national parks, biosphere
reserves, wetlands, mangroves and coral reefs for
conservation of wild biodiversity; ex situ conservation;
Principles and practices; botanical gardens, field gene
banks, seed banks, in vitro repositories, cryobanks;
general account of the activities of Botanical Survey of
India (BSI), National Bureau of Plant Genetic Resources
(NGPGR), Indian Council of Agricultural Research (ICAR),
Council of Scientific & Industrial Research (CSIR) and
the Department of biotechnology (DBT) for conservation,
non – formal conservation efforts.
Theories of species diversity, General Pattern of
Species diversity, Biodiversity conservation, Assessment
of species diversity.
Green revolution: Benefits and adverse consequences.
Techniques of Biosystematics & Ecology:
Recent sensing technology – History of remote sensing,
principles, types of remote sensing, applications.
Geographic information system (GIS), Modern techniques
of herbarium preparation and other related ecological
methods.
Cell & Molecular Biology:
General concept of prokaryotic and eukaryotic cell.
Mitotic cell division, C - value paradox, replicon
function in eukaryotes, chromosomal DNA maturation,
regulation of cell cycle, Cyclin concept of cell
division cycle in Yeast.
Cytoskeleton, general concept on cytoskeleton,
Microtubules, microtubular organization in cilia,
flagella and centrioles.
Ribosome: Molecular organization of ribosomal RNA genes,
ribosome biogenesis.
Organelle genome: molecular structure, diversity and
organization of chloroplast DNA (cp DNA). Nucleo -
chloroplastic interactions.
Mitochondria: structure and organization of genome,
biogenesis.
Nucleus: Ultra-structural organization and function of
nuclear components: nuclear envelope, transportation of
biomolecules through nuclear envelope, nucleolus and
nuclear matrix. Chromatin organization: Chromosome
structure and organization of nucleosomes, nature of
active chromatin. Karyotyep concept and analysis.
Structure and functions of microbodies, golgi apparatus,
lysosomes and endoplasmic reticulum.
Plasma membrane: structure, models and functions; sites
for ATPase, ion carriers, channels and pumps, receptors.
DNA replication: Mode of DNA replication (Messelson and
Stahl Experiment, Taylor’s Experiment), Molecular basis
of replication in prokaryotes – Enzymes involved in
replication, different models of replication, Origin and
initiation of replication in E. coli., X 174, and M 13,
Klenow fragment, Uracil fragment, Okazaki fragment, Nick
translation, DNA methylation in replication.
Transcription: Enzymes involved in transcription,
promoter and enhancer, PRIBNOW box, TATA box, Shine-Dalgarno
sequence; Initiation, elongation and termination in
prokaryotes, polyadenylation, methylated Cap, Mehanism
of m-RNA splicing, RNA editing.
Translation: Activation of amino acid, Initiation of
polypeptide Chain, Elongation and termination of
polypeptide, polysomes and coupled translation.
Plant Biotechnology:
Plant biotechnology: basic concepts, principles and
scope. Concept of cellular differentiation and
totipotency.
Callus culture, habituated callus, factors controlling
callus growth and proliferation. Cell suspension
culture, growth pattern, factors controlling ideal cell
suspension culture, synchronization of cell culture,
Cell growth and viability, Utility of cell culture.
In vitro exudation, biochemical basis, problem and
measures.
In vitro technique of plant regeneration, mode of
regeneration, factors affecting regeneration,
Applications. Shoot tip / Meristem culture, techniques,
virus indexing, concept of virus cross protection,
utility. Embryo culture, technique, application of
embryo culture.
Protoplast culture and somatic hybridization: Protoplast
culture techniques, isolation, purification and culture
of protoplasts, application, Somatic hybridization and
its mechanism, factors, selection of fused protoplast or
product, Application.
Micro propagation: Concept, in vitro techniques, factors
affecting in vitro stages of micro propagation,
vitrification, Application of micro propagation in plant
improvement.
Production of isogenic lines: Anther and Pollen culture,
General trends of haploid plant production, Basic
techniques of haploid culture, Factors affecting
androgenesis, diplodization of haploids, Utilization of
haploids in Agriculture.
Somatic embryogenesis: Structure and definition of
somatic embryos, Modes and stages of somatic embryo
development, Factors affecting somatic embryo
development, Significance of somatic embryo in plant
cell culture.
Synthetic seed technology (Artificial seed): Concept of
artificial seed, Basic requirements for artificial seed
production, types of gelling agent, principle and
condition of encapsulation, methods of encapsulation.
Somaclonal variation: Somalcones, Source of somaclonal
variation, Factors affecting the nature and frequency of
somaclonal variation. Molecular basis of somaclonal
variation. Chromosomal instability.
Cytodifferentiation: Biochemical and molecular basis of
differentiation in plant tissue culture.
Cell line and cell line selection techniques: Variant
and mutant cell line, Selection strategies of variant
cell line, Genetical and biochemical basis of variant
cell line production, Applications.
Biotechnology of secondary metabolite production:
Primary and secondary metabolites, Secondary metabolite
production through in vitro techniques, Role of
elicitors, Co-culture technique and biotransformation.
Transformation technology: Concept of transgenic plant
production, Agrobacterium mediated DNA transformation,
Classification of Agrobacteria, Tumor inducing principle
and the Ti plasmid, Organization of Ti plasmid, Function
of virulence genes, T-DNA processing, transfer and
integration, Advantage and disadvantage of Agrobacterium
gene transfer system.
Gene cloning vector: Concept of Plasmids and Plasmid
vectors (pBR 322, pUC vectors and Yeast plasmid
vectors), Agrobacterium tumifaciens as gene vectors:
Disarmed Ti plasmid, Co-integrative and Binary vectors.
Transgenics in crop improvements: Transgenics for male
sterility, terminator seed and insect resistance.
Hairy root culture: General properties of A. rhizogenes
and Ri – plasmids, Factors affecting virualance of A.
rhizogene strains, characteristic of hairy root
transformants, Establishment of hairy root culture.
Genetics of transformation. Application of hairy root
culture.
Germplasm conservation: Cryopreservation techniques,
Factors affecting the freezing process and viability of
frozen tissue; Prospect of cryopreservation.
Intellectual Property rights (IPR): Forms of protection,
Patent and types of patents, Criteria for utility
patent. Revocation of patent, Revocation of the turmeric
patent. Genetically Modified Organisms, Benefits and
Controversies.
Green House: Concept of green house, Types of green
houses based on shape of the structure, function or
utilities, nature of covering materials, Use and
utility.
Genetics & Cytogenetics:
Mendelian inheritance, alleles, pseudo-alleles and
multiple alleles, cis-trans test. Independent assortment
and crossing over; chromosome mapping; linkage groups,
homologous recombination, molecular mechanism of
recombination; role of RecA and RecBCD enzymes, Site
specific recombination.
Population genetics, genetic drift and polymorphism.
Genetic code, Specialized types of Chromosomes- Polytene,
Lampbrush and B-chromosomes. Sex determination and
Dosage compensation.
Regulation of gene expression: Lac, Tryptophan and
Arabinose operon. Microbial genetics – transformation,
conjugation, sexduction and transduction.
Mutation – spontaneous and induced mutations; physical
and chemical mutagens; molecular basis of gene mutation;
site mutagenesis; Suppressor mutants, initiation of
cancer at cellular level; proto oncogenes and oncogenes.
Cytogenetics of aneuploids and structural heterozygotes:
Effect of aneoploidy on phenotype in plants;
transmission of monosomics and trisomics and their uses
in chromosome mapping of diploid and polyploidy species;
breeding behaviour and genetics of structural
heterozygotes; complex translocation heterozygotes;
translocation tester sets; Robertsonian translocations;
B – A translocation.
Alien gene transfer through chromosome manipulations:
Transfer of whole genome, examples from wheat, Arachis
and Brassica; transfer of individual chromosomes and
chromosome segments; methods for detecting alien
chromatin; production, characterization and utility of
alien addition and substitution lines.
Interphase nucleus, the chromatin and the chromosome,
loops, domains and scaffold in eukaryotic chromosomes;
Karyotype evolution, Special chromosomes, chromosome
puffing, CEN fragment and telomeres.
Principles of cytotaxonomy – cytological and Genetic
methods for finding out the basic chromosome number and
affinities of a species.
Molecular basis of recombination – Homologous
recombination and site of specific recombination.
Holliday model. Initiation of recombination through
double stranded breaks. Single strand assimilation of
bacterial recombination and role of Rec A protein. Gene
conversion.
Gene cloning and sequencing, construction of genomic
cDNA libraries, choice of vectors, DNA sequencing – the
ultimate fine structure of gene, DNA fingerprinting,
Chromosome walking, Restriction endonucleases,
Restriction mapping. RFLP (Restriction Fragment Length
Polymorphism).
Polymerase chain reaction (PCR): components in PCR,
inverse PCR, reverse transcriptase mediated PCR (RT -
PCR), cloning of PCR products, genetic engineering by
PCR, applications.
Organisation of interrupted genes. Evolution of
interrupted genes. Mechanism of RNA splicing (mRNA, tRNA
and rRNA), RNA editing. Simple sequence of DNA,
satellite DNA. Complexicity of DNA determined through
Cot ˝, Nonrepititive DNA, expression of non-repetititive
genes
In situ hybridization - concept and techniques, flow
cytometry and confocal microscopy in karyotype analysis.
Mobile genetic elements: IS elements, Composite
transposon, Replicative and Nonreplicative
transposition, Controlling elements in maize (AC/dc, Spm/dspm
family), Hybrid dysgenesis in Drosophila. Retroposons –
mechanism of inserting DNA copies of an RNA viral genome
into the host chromosome, Yeast Ty elements.
Eukaryotic RNA polymerase – Initiation and regulation of
transcription
Protein translocation: Co-translational and Post
–translational transfer. Role of leader sequence, Signal
sequence. Transfer of protein from the ER through Golgi
stacks.
Lytic and Lysogenic cascade. Site directed mutagenesis:
DNA damage and repair mechanism (SOS, post replication),
inherited human diseases and defects in DNA repair.
Genotoxicity – bioindicators, genotoxic agents, types
and nature of genotoxic affects, different tests for
cytological evaluation of genotoxicity.
Antisence RNA technology and its application: somatic
cell genetics.
Plant Breeding:
Mechanism of pollination control in crop plants: self
incompatibility, male sterility and application in plant
breeding. Selection: mass selection, pure line
selection, clonal selection and recurrent selection.
Heterosis: hybrid and synthetic varieties, inbreeding
depression, theories of heterosis. Crop improvement by
pedigree method, bulk method and back cross method.
Mutation breeding in crop improvement.
Microbiology:
Fine structure of bacteria, chemotaxis, Bacterial growth
curve. Microbial media: types, preparation, methods of
sterilization. Isolation of microorganism from
environment and infected tissue. Techniques of pure
culture. Staining: stains and dyes (negative staining,
simple staining, differential staining and mechanism of
staining), Acid fast staining. Microbial ecology:
ecological groups, soil microbiology, water
microbiology, microbial analysis of water purity.
Microbiology of sewage (waste water) treatment: methods
and measure, biodegradation, microbial leaching.
Microbial interaction: Mutualism, commensalisms,
antagonism and parasitism. Nitrogen fixation: symbiotic
and asymbiotic. Pollution indicator microorganism, MPN
and membrane filtration. Industrial microbiology.
Fermenter, batch fermentation vs continuous
fermentation. Industrial production of enzymes (amylase
and protease). Industrial production of amino acids
(lactic acid and citric acid). Microbiology of milk and
milk products.
Viruses – Characteristics and ultra structure of virions;
isolation and purification of viruses; chemical nature,
replication, transmission of viruses; economic
importance.
Biological Techniques:
Microscopy – principle and functioning, Fluorescence
microscopy. Centrifugation – principle, application and
concept of S value. Spectroscopy: UV - VIS
spectrophotometry. Microtome: killing, fixation and
staining. Chromatography: Paper chromatography, TLC,
HPLC, GLC. Principles of electrophoresis: native and SDS
PAGE. Principle of PCR and its application. Principle
and staining of chromosomes with Fuelgen reagent.
Plant Physiology:
Plant-Water relations: Water potential and its
components, mechanism of water transport through xylem,
comparison of xylem and phloem transport, phloem loading
and unloading, passive and active transport, various
theories on the mechanism of active transport, role of
root microbes in facilitating nutrient uptake.
Mineral Nutrition: Macro, micro and trace elements, role
of various elements in plant metabolism and deficiency
symptoms, sand culture, hydroponics and aeroponics,
balanced nutrient solution.
Structure of chloroplast: Ultrastructure of chloroplast;
Development of chloroplast.
Photosynthesis and Photochemistry: Historical
background, photosynthetic pigments and light harvesting
complex, photo-oxidation of water – mechanism of
electron transport, carbon assimilation-Calvin cycle,
HSK-cycle, CAM pathway, mechanism of photorespiration
and its significance.
Photochemistry and Photomechanism: Evolution of
photosynthetic apparatus, photosynthetic unit,
mechanisms of electron and proton transport in PS I & PS
II, structure of ATP-ase complex.
Assimilation of carbon: Types of C4 cycle, biosynthesis
of starch and sucrose, energetic of photosynthesis in
different pathway.
Transport of photosynthates and plant productivity:
Mechanism of transport of photosynthesis; Photosynthesis
in Agriculture production, C3 – C4 Hybrids, measurement
of productivity / Biomass.
Respiration: Overview of plant respiration, glycolysis,
TCA cycle, electron transport chain (ETC) and mechanism
of ATP synthesis, glyoxylate cycle, pentose phosphate
pathway (PPP), alternative oxidase systems. Amphibolic
nature of TCA cycle, cyanide – resistant respiration;
biochemical control/ Regulation of Respiration.
Photorespiration: RuBisCo Kinetics, Energetic of
photorespiration.
Plant hormones and Growth regulators: Historical
background, structure and biosynthesis of IAA, GA and
Cytokinin (CK), bioassay, physiological effects and
mechanism of action of IAA, GA, CK, Ethylene and
Abscisic acid.
Synthetic plant growth regulators and elicitors: Role of
brassionsteroids, polyamines, jasmonic acid and
salicylic acid, phytohormones in tissue culture and
agriculture.
Nitrogen fixation and metabolism: Overview of nitrogen
fixation at global level, structure of nitrogenase and
mechanism of biological nitrogen fixation, recognition
process and nodule formation, mechanism of nitrate and
ammonium assimilation.
Nitrogen mineralization – ammonification, nitrification
and denitrification.
Regulation of Nitrogen fixation, Nif - gene, Nod
factors, Hup-gene, Sym-gene, Rhizobium and its
inoculation groups, function of nitrogenase, hydrogenase,
ATP-ase and leghaemoglobin in BNF, production of
inoculum and biomanure, asymbiotic nitrogen fixing
organisms.
Sulphur metabolism: Sulphate uptake, transport and
assimilation.
Sensory photobiology: History of discovery of
phytochromes and cryptochromes, and their photochemical
properties, photophysiology of light-induced responses,
cellular localization, Isolation of phytochrome,
molecular mechanism / mode of action of photomorphogenic
receptors, signaling and gene expression.
Physiology of flowering: Photoperiodism, photoperiodic
classes, photoperiodic induction, role of phytochrome in
flower initiation, vernalization and its role,
endogenous clock.
Photomorphogenesis: Discovery of Photomorphogenesis, and
skotomorphogenesis; Photomorphogenetic response in
plants; Morphological, Physiological and Cellular
features of morphogenesis and Regulatory aspects of
photomorphogeneis in higher plants.
Senescence and abscission: Senescence and ageing,
physiological and biochemical changes during senescence.
Physiology of seed germination: Dormancy of seed, causes
of dormancy and ways of breaking it, biochemical changes
during seed germination, factors affecting germination,
role of light on germination and involvement of
phytochrome.
Seed germination and seedling growth: Hormonal control
of seedling growth; gene expression.
Seed Maturation: Biochemical changes during maturation
of Endospermous and Albuminous seeds; Seed longevity;
Testing for seed viability; Factors affecting longevity.
Bud dormancy: Dormancy of buds and under ground storage
organs.
Physiology of Growth: Growth Curves of Unicellular and
multicellular plants; pattern of growth and development;
Steps in cell growth and development; Primary wall
changes during growth; The cell cycle; Growth kinetics;
Growth of plant organs (roots; stems; leaves only in
brief).
Signal Transduction: Overview, receptors and G –
proteins, phospholipids signaling, role of cyclic
nucleotides, calcium – calmodulin cascade, diversity in
protein kinases and phosphatases, specific signaling
mechanisms, e.g., two-component sensor-regulator system
in bacteria and plants, signal transduction and gene
expression, sucrose-sensing mechanism.
Stress physiology: Plant responses to biotic and abiotic
stresses, mechanism of biotic and abiotic tolerance, HR
and SAR, water deficit and drought resistance, salinity
stress, metal toxicity, freezing and heat stress,
chilling injury, oxidative stress, production of active
oxygen and superoxide radicals and their role; radiation
stress.
Secondary Plant Metabolites: Biosynthesis of
Chlorophyll; Carotenoids; Phenols; Alkaloids; Steroids
and Flavonoid pigments (e.g. Anthocyanin).
Biochemistry:
Carbohydrates -Classification- monosaccharides,
disaccharides, and polysaccharides, reducing and
non-reducing properties of sugars, structure of some
mono and disaccharides, dextro and levorotatory
properties of monosaccharides, biochemical tests,
biosynthesis of sucrose and starch in plants.
Lipids: Classification, properties, saturated
unsaturated fatty acids, plant waxes, steroids,
cholesterol and lecithin.
Amino acids: Classification, structure and biosynthetic
pathways.
Protein structure: Primary structure - Purification and
determination of amino-acid sequence, identification of
N–terminal and C–terminal of peptide. Secondary
structure: Configuration and conformation –
β-conformation and the pleated sheet. Tertiary structure
and quaternary structure of Proteins, Ramchandran Plot.
Protein metabolism: Transamination and oxidative
deamination, pathway/mechanism of Coenzyme-A (Co-A)
formation.
Enzyme: Reaction rates catalyzed by enzymes, enzyme
kinetics study, Michaelis-Menten constant (Km) and its
derivation, reversible and irreversible inhibition,
inhibition constant (ki) and Dixon plot, allosteric
inhibition and its mechanism, Coenzymes and their role
in plant metabolism, ribozyme and abzyme.
Biochemistry of nucleic acids: Structure of nitrogenous
bases, nucleotides and polynucleotides, structure of
DNA- the double helix, A, B and Z forms.
Biophysics:
Acid, Bases and Buffers: Osmosis – Protolysis of water,
concept of pH, pKa, buffer, Henderson – Hasselbalch
equation & determination of pH, Osmosis and Osmotic
Pressue, Van’t Hoff equation, determination of OP and
biological significance. Diffusion – general principles,
Fick’s law and Graham’s Law, biological significance.
Bioenergetics: Principles of thermodynamics, concept of
entropy and enthalpy, free energy and chemical
potential, redox reactions, standard free energy change
(ΔG0'), calculation of ΔG0' for any biochemical reaction
including ATP hydrolysis. Oxidative phosphorylation –
Chemiosmotic hypothesis
Surface phenomena and Colloidal state: Surface tension
and surfactants, Gibbs-Thomson Principle, biological
significance. Viscosity – principles, Strokes’ law and
Poisseuill’s law, biological significance. Collloids –
Characteristics of colloidal particle, optical and
electrical properties.
Biostatistics:
Graphical representation of Data; Different types- Bar
diagram, Pie chart, histogram, frequency polygon, Ogives.
Central tendency- Mean, mode and median; Relation among
AM, GM and HM.
Measures of dispersion- Mean Deviation, Quartile
deviation, Standard deviation and standard error,
Standard error mean.
Probability – Classical definition of probability,
limitations of classical probability, Theorems -total
probability and compound probability. Binomial law and
probability distribution.
Correlation- coefficients of correlation, Spearson’s
Rank correlation.
Regression- regression lines and regression coefficient.
Chi square test; Test for goodness of fit- Pearson X2 ,
Contingency Chi square, F-test and Z – test.
t- test: Unpaired ‘t’ test, Paired ‘t’ test.
Analysis of Variance – one way ANOVA and two way ANOVA.
Computer Application:
History of development of computers, Mainframe, mini,
micro and Super Computer Systems.
General awareness of computer Hardware i.e. CPU and
other peripheral devices (input/output and auxillary
storage devices). Basis knowledge of computer systems
software and programming language i.e. Machine language,
Assembly language and higher level language. General
awareness of popular commercial software packages like
LOTUS, DBASE, WordStar, other scientific application
packages. Microsoft Office XP – General introduction:
working with Ms Word, Power Point Presentation, Ms
Excel.
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